hucira.load_lupus_data

hucira.load_lupus_data#

hucira.load_lupus_data(save_dir='', force_download=False)#

Download and load the lupus dataset from CELLxGENE.

Reference: Perez et al., Single-cell RNA-seq reveals cell type-specific molecular and genetic associations to lupus. Science 376, eabf1970 (2022). DOI:10.1126/science.abf1970

Parameters:

  • save_dir (str) – Directory where the file will be saved.

  • force_download (bool) – Allows user to force a fresh download from CellxGene.

Return type:

AnnData

Returns:

-adata (AnnData) Lupus AnnData object.

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